Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5544

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5543: 13911 - K15190 MEPCE, BCDIN3 7SK snRNA methylphosphate capping enzyme, at 338637 to 339590 13911 mRNA_5544: 13912 - Hypothetical Protein, at 340231 to 341133 13912

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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339,629 - 0.9
339,636 - 0.9
339,650 + -0.1
339,677 + 1.3
339,765 - 0.6
339,786 + -0.1
339,796 - 0.2
339,802 + 1.6
339,806 + 0.6
339,815 + 0.2
339,871 - 0.5
339,878 + 0.2
339,897 + 0.2
339,963 - 1.6
339,975 + 0.8
339,986 + 0.4
340,003 + 1.0
340,003 - 0.5
340,084 - 0.3
340,125 - 0.5
340,233 + -0.2
340,234 - -0.2
340,236 + 0.8
340,243 - -0.2
340,380 + 13912 mRNA_5544 0.17 0.3
340,528 + 13912 mRNA_5544 0.33 1.0
340,551 + 13912 mRNA_5544 0.35 -1.4
340,774 + 13912 mRNA_5544 0.60 0.7
340,814 - 13912 mRNA_5544 0.65 2.0
340,964 - 13912 mRNA_5544 0.81 1.0
341,146 + 1.4
341,250 - -0.3
341,264 - -0.5
341,284 + -0.0
341,549 - 0.4
341,616 - 0.5
341,642 - -1.1
341,697 + 0.1
341,698 - 0.5
341,724 + 0.5
341,732 - -0.2
341,742 + -0.4
341,856 + 0.1
341,859 + 0.6
342,057 - -0.4
342,087 - 1.5