Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5489

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5488: 13856 - K01078 E3.1.3.2 acid phosphatase, at 214884 to 216932 13856 mRNA_5489: 13857 - KOG1263 Multicopper oxidases, at 217387 to 219494 13857 mRNA_5490: 13858 - Hypothetical Protein, at 219614 to 220900 13858

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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216,564 - 13856 mRNA_5488 0.82 -0.0
216,982 - -1.7
216,997 - -0.7
217,002 + -0.3
217,147 + -0.4
217,150 + 0.1
217,152 - 1.2
217,275 - 1.3
217,298 + 0.6
217,300 + 1.3
217,317 - 0.8
217,613 - 13857 mRNA_5489 0.11 0.6
217,651 + 13857 mRNA_5489 0.13 0.3
217,672 - 13857 mRNA_5489 0.14 0.5
217,769 + 13857 mRNA_5489 0.18 1.4
217,922 - 13857 mRNA_5489 0.25 1.0
217,923 + 13857 mRNA_5489 0.25 1.6
218,092 - 13857 mRNA_5489 0.33 0.2
218,300 - 13857 mRNA_5489 0.43 -0.1
218,730 - 13857 mRNA_5489 0.64 -0.2
218,770 + 13857 mRNA_5489 0.66 0.2
219,190 + 13857 mRNA_5489 0.86 0.5
219,208 + 13857 mRNA_5489 0.86 0.4
219,534 - 0.3
219,652 - -0.2
219,704 - 0.5
219,883 + 13858 mRNA_5490 0.21 -0.5
220,139 + 13858 mRNA_5490 0.41 0.4
220,274 + 13858 mRNA_5490 0.51 0.1
220,298 + 13858 mRNA_5490 0.53 0.2
220,301 - 13858 mRNA_5490 0.53 0.7
220,408 - 13858 mRNA_5490 0.62 1.6