Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5405

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5404: 13772 - Hypothetical Protein, at 22508 to 23850 13772 mRNA_5405: 13773 - K08869 ADCK, ABC1 aarF domain-containing kinase, at 23970 to 26723 13773 mRNA_5406: 13774 - KOG2742 Predicted oxidoreductase, at 26869 to 28382 13774

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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23,068 - 13772 mRNA_5404 0.42 0.5
23,070 + 13772 mRNA_5404 0.42 -2.3
23,070 - 13772 mRNA_5404 0.42 -0.3
23,095 + 13772 mRNA_5404 0.44 1.3
23,279 + 13772 mRNA_5404 0.57 0.7
23,283 + 13772 mRNA_5404 0.58 1.3
23,330 - 13772 mRNA_5404 0.61 0.3
23,359 - 13772 mRNA_5404 0.63 0.5
23,432 - 13772 mRNA_5404 0.69 -0.3
23,641 + 13772 mRNA_5404 0.84 0.4
23,774 - 0.7
23,900 - 0.0
23,908 - 0.7
23,929 + 0.4
23,967 + 0.4
24,070 - 0.5
24,078 - 1.4
24,081 + 0.4
24,518 + 13773 mRNA_5405 0.20 0.8
24,766 - 13773 mRNA_5405 0.29 -1.5
24,827 - 13773 mRNA_5405 0.31 -0.1
24,850 - 13773 mRNA_5405 0.32 -0.0
25,099 - 13773 mRNA_5405 0.41 -2.9
25,373 - 13773 mRNA_5405 0.51 0.6
25,645 + 13773 mRNA_5405 0.61 0.1
25,667 - 13773 mRNA_5405 0.62 0.6
25,677 + 13773 mRNA_5405 0.62 -0.2
25,846 + 13773 mRNA_5405 0.68 0.9
25,991 - 13773 mRNA_5405 0.73 0.1
26,132 + 13773 mRNA_5405 0.79 0.5
26,186 + 13773 mRNA_5405 0.80 0.5
26,685 - 0.4
26,817 + 0.1
26,857 + -0.1
26,985 - 0.1
26,990 - 1.8
27,099 - 13774 mRNA_5406 0.15 0.2
27,138 - 13774 mRNA_5406 0.18 -0.2
27,140 - 13774 mRNA_5406 0.18 0.4
27,155 + 13774 mRNA_5406 0.19 2.3
27,155 + 13774 mRNA_5406 0.19 -0.6
27,174 - 13774 mRNA_5406 0.20 -0.8
27,213 + 13774 mRNA_5406 0.23 -0.0
27,260 + 13774 mRNA_5406 0.26 0.2
27,263 + 13774 mRNA_5406 0.26 1.6
27,529 + 13774 mRNA_5406 0.44 -0.5
27,545 + 13774 mRNA_5406 0.45 -0.1
27,572 + 13774 mRNA_5406 0.46 0.1
27,590 - 13774 mRNA_5406 0.48 0.1
27,698 + 13774 mRNA_5406 0.55 0.0
27,704 - 13774 mRNA_5406 0.55 0.1
27,705 + 13774 mRNA_5406 0.55 1.3
27,721 + 13774 mRNA_5406 0.56 0.0