Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5367

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5366: 13734 - KOG1752 Glutaredoxin and related proteins, at 550518 to 551881 13734 mRNA_5367: 13735 - K08838 STK24_25_MST4 serine/threonine-protein kinase 24/25/MST4, at 552284 to 555242 13735 mRNA_5368: 13736 - K09553 STIP1 stress-induced-phosphoprotein 1, at 555613 to 556991 13736

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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551,410 + 13734 mRNA_5366 0.65 0.6
551,890 - 0.4
552,027 - 0.3
552,167 - 0.2
552,287 + 0.8
552,542 - -0.0
552,616 + 13735 mRNA_5367 0.11 -0.3
552,625 - 13735 mRNA_5367 0.12 0.3
552,678 - 13735 mRNA_5367 0.13 2.0
552,963 - 13735 mRNA_5367 0.23 -0.3
553,996 - 13735 mRNA_5367 0.58 0.1
554,089 + 13735 mRNA_5367 0.61 0.9
554,249 + 13735 mRNA_5367 0.66 -1.1
554,250 + 13735 mRNA_5367 0.66 -0.0
554,382 - 13735 mRNA_5367 0.71 0.2
554,499 - 13735 mRNA_5367 0.75 0.7
554,823 + 13735 mRNA_5367 0.86 -0.9
555,013 + 0.3
555,105 - 0.8
555,156 - 0.3
555,322 - 2.0
555,454 + 0.1
555,881 + 13736 mRNA_5368 0.19 1.0
556,010 + 13736 mRNA_5368 0.29 0.5