Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5304

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5303: 13671 - K17608 STRN1_3_4 striatin 1/3/4, at 405190 to 408801 13671 mRNA_5304: 13672 - KOG3598 Thyroid hormone receptor-associated protein complex, subunit TRAP230, at 409088 to 413869 13672 mRNA_5305: 13673 - K14859 SSF1_2 ribosome biogenesis protein SSF1/2, at 414349 to 416763 13673

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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408,182 - 13671 mRNA_5303 0.83 1.9
408,485 + -0.3
408,522 + 1.0
408,525 + 0.6
408,596 + 0.2
408,806 + 0.3
408,881 - 0.4
409,158 - -0.3
409,176 + -0.3
409,330 - -0.6
409,336 + -0.0
409,363 - 0.0
409,682 + 13672 mRNA_5304 0.12 0.3
409,865 - 13672 mRNA_5304 0.16 0.2
409,905 - 13672 mRNA_5304 0.17 -0.9
409,919 + 13672 mRNA_5304 0.17 0.6
410,072 + 13672 mRNA_5304 0.21 0.1
410,108 - 13672 mRNA_5304 0.21 1.3
410,263 + 13672 mRNA_5304 0.25 -0.0
410,452 - 13672 mRNA_5304 0.29 -0.3
410,544 + 13672 mRNA_5304 0.30 0.2
410,587 - 13672 mRNA_5304 0.31 1.0
411,333 + 13672 mRNA_5304 0.47 0.6
411,356 - 13672 mRNA_5304 0.47 1.7
411,614 - 13672 mRNA_5304 0.53 -0.0
411,748 + 13672 mRNA_5304 0.56 0.9
412,087 + 13672 mRNA_5304 0.63 0.7
412,479 - 13672 mRNA_5304 0.71 -0.1
412,885 + 13672 mRNA_5304 0.79 0.5
413,378 - 13672 mRNA_5304 0.90 1.0
413,495 + 0.4
413,645 - -0.4
413,918 + -0.8
413,942 - 0.5
414,232 + 0.3
414,245 - 0.2