Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5293

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5292: 13660 - Hypothetical Protein, at 372061 to 373005 13660 mRNA_5293: 13661 - Hypothetical Protein, at 373499 to 378247 13661 mRNA_5294: 13662 - K02830 HRAD1, RAD17 cell cycle checkpoint protein, at 378624 to 380568 13662

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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372,585 - 13660 mRNA_5292 0.55 0.2
372,589 + 13660 mRNA_5292 0.56 0.4
372,692 + 13660 mRNA_5292 0.67 0.3
372,701 - 13660 mRNA_5292 0.68 0.3
372,717 - 13660 mRNA_5292 0.69 -0.3
372,721 + 13660 mRNA_5292 0.70 -0.3
372,730 - 13660 mRNA_5292 0.71 -0.0
372,730 + 13660 mRNA_5292 0.71 0.1
372,745 - 13660 mRNA_5292 0.72 -0.6
372,840 + 13660 mRNA_5292 0.82 0.1
372,843 - 13660 mRNA_5292 0.83 -0.6
372,850 + 13660 mRNA_5292 0.83 -0.0
372,860 + 13660 mRNA_5292 0.85 0.5
372,876 + 13660 mRNA_5292 0.86 0.4
372,933 + 0.2
372,988 - -0.6
373,016 - -0.6
373,018 - 0.2
373,023 + 0.4
373,031 + 0.2
373,037 - 0.0
373,040 + 0.7
373,053 + 0.6
373,076 + 1.0
373,108 + 0.9
373,164 - 0.0
373,170 + 0.7
373,191 - -0.5
373,192 + 0.3
373,202 + 0.0
373,213 + 0.4
373,213 + 0.8
373,220 - 0.5
373,222 + 0.7
373,347 + 0.3
373,350 + 1.4
373,368 + -0.2
373,623 - 0.8
373,743 + -0.1
373,827 + 0.2
374,059 - 13661 mRNA_5293 0.12 0.7
374,122 - 13661 mRNA_5293 0.13 0.8
374,345 + 13661 mRNA_5293 0.18 0.7
374,545 - 13661 mRNA_5293 0.22 -0.5
374,802 - 13661 mRNA_5293 0.27 -0.4
375,344 - 13661 mRNA_5293 0.39 0.9
375,544 + 13661 mRNA_5293 0.43 -0.0
375,546 - 13661 mRNA_5293 0.43 0.4
375,575 - 13661 mRNA_5293 0.44 1.2
375,599 - 13661 mRNA_5293 0.44 -0.1
375,705 + 13661 mRNA_5293 0.46 0.3
375,737 + 13661 mRNA_5293 0.47 0.5
376,029 + 13661 mRNA_5293 0.53 -0.6
376,642 + 13661 mRNA_5293 0.66 -0.5
376,837 - 13661 mRNA_5293 0.70 1.4
376,882 + 13661 mRNA_5293 0.71 0.2
376,884 + 13661 mRNA_5293 0.71 0.3
376,892 - 13661 mRNA_5293 0.71 -1.0
376,975 + 13661 mRNA_5293 0.73 -0.1
377,627 - 13661 mRNA_5293 0.87 0.8
377,705 + 13661 mRNA_5293 0.89 -0.3
378,003 - 0.0
378,022 - 0.3
378,061 + 1.2
378,130 + 0.8
378,151 + 0.5
378,307 - 0.7
378,334 + 0.5
378,459 + 0.0
378,509 - 0.8
378,704 - -0.4
378,738 - 0.5
379,036 - 13662 mRNA_5294 0.21 -1.2
379,054 - 13662 mRNA_5294 0.22 0.0
379,059 + 13662 mRNA_5294 0.22 0.2
379,162 + 13662 mRNA_5294 0.28 0.5
379,179 + 13662 mRNA_5294 0.29 0.5