Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5263

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5262: 13630 - K00161 PDHA, pdhA pyruvate dehydrogenase E1 component alpha subunit, at 306876 to 308801 13630 mRNA_5263: 13631 - BLAST pyruvate dehydrogenase E1 component subunit alpha [Mi..., at 309267 to 309581 13631 mRNA_5264: 13632 - Hypothetical Protein, at 310145 to 311167 13632

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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308,859 - -0.1
308,863 - 0.5
308,870 + 0.4
308,870 + 0.9
308,883 + -0.4
309,135 + -0.1
309,159 - 0.1
309,174 - -0.1
309,201 + 0.7
309,298 - 0.7
309,311 - 13631 mRNA_5263 0.14 1.2
309,440 - 13631 mRNA_5263 0.55 0.1
309,452 + 13631 mRNA_5263 0.59 0.2
309,462 - 13631 mRNA_5263 0.62 0.2
309,768 + -0.3
309,782 + -1.0
309,784 - 0.4
309,855 + 0.9
309,855 - 0.3
309,875 + -0.9
309,881 - -0.8
309,885 - -1.4
309,909 + 0.6
309,920 - 0.1
309,923 - 1.2
309,935 - 0.8
309,948 + -0.3
310,064 - 0.3
310,065 - 0.3
310,072 - 0.7
310,078 + -0.1
310,090 - -0.2
310,218 - 0.2
310,360 - 13632 mRNA_5264 0.21 -0.6
310,392 + 13632 mRNA_5264 0.24 -0.9
310,393 - 13632 mRNA_5264 0.24 0.2