Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5259

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5258: 13626 - KOG0538 Glycolate oxidase, at 297725 to 299742 13626 mRNA_5259: 13627 - K01424 E3.5.1.1, ansA, ansB L-asparaginase, at 300162 to 301995 13627 mRNA_5260: 13628 - K02263 COX4 cytochrome c oxidase subunit 4, at 302752 to 303807 13628

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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299,330 + 13626 mRNA_5258 0.80 0.1
299,438 - 13626 mRNA_5258 0.85 0.2
299,594 + 0.0
299,895 - 0.5
299,921 + 1.2
300,209 + 1.5
300,220 + -1.1
300,237 + -1.3
300,655 - 13627 mRNA_5259 0.27 0.8
300,776 - 13627 mRNA_5259 0.33 0.9
300,803 - 13627 mRNA_5259 0.35 0.7
301,046 + 13627 mRNA_5259 0.48 1.6
301,179 - 13627 mRNA_5259 0.55 0.1
302,085 - 0.5
302,105 + 0.4
302,126 + 0.7
302,231 - 0.1
302,371 + -0.2
302,378 - 0.9
302,378 + 1.1
302,387 - 0.7
302,389 - -0.1
302,391 + 1.2
302,395 - 0.6
302,399 - 0.3
302,404 - 0.6
302,512 - 1.0
302,549 + 1.1
302,677 + -0.5
302,677 + 0.4
302,680 - 0.0
302,687 - 1.9
302,691 - 0.2
302,694 + -0.5
302,706 + 0.5