Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5238

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5237: 13605 - K02914 RP-L34, MRPL34, rpmH large subunit ribosomal protein L34, at 234183 to 234602 13605 mRNA_5238: 13606 - KOG1199 Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase, at 235141 to 236473 13606 mRNA_5239: 13607 - K10859 ALKBH2 alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, at 236624 to 237646 13607

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
234,781 + 0.3
234,821 - 0.4
234,822 - 0.4
235,389 - 13606 mRNA_5238 0.19 0.6
235,564 + 13606 mRNA_5238 0.32 0.6
235,710 - 13606 mRNA_5238 0.43 0.7
235,785 - 13606 mRNA_5238 0.48 0.2
236,125 + 13606 mRNA_5238 0.74 -0.7
236,295 + 13606 mRNA_5238 0.87 0.3
236,453 + -0.5
236,630 - 0.5
236,723 - 0.9
236,734 + 13607 mRNA_5239 0.11 0.4
236,743 + 13607 mRNA_5239 0.12 0.6
236,873 - 13607 mRNA_5239 0.24 -0.3
237,009 - 13607 mRNA_5239 0.38 0.5
237,342 + 13607 mRNA_5239 0.70 0.0