Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5235

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5234: 13602 - KOG0725 Reductases with broad range of substrate specificities, at 224900 to 226337 13602 mRNA_5235: 13603 - KOG1178 Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes, at 226852 to 231804 13603 mRNA_5236: 13604 - KOG2031 Tyrosyl-DNA phosphodiesterase, at 232008 to 233871 13604

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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226,489 - 0.4
226,506 + -0.1
226,520 - 0.7
226,544 + -0.9
226,576 + -0.4
226,578 + -1.3
226,579 - -0.8
226,656 + -0.1
226,662 - -0.2
226,666 - 0.3
226,757 - 0.4
226,767 - -0.4
226,784 - -1.9
226,785 - 0.1
226,805 - -0.2
226,913 + -1.1
227,077 + 0.7
227,103 + 0.3
227,225 + -0.3
227,388 - 13603 mRNA_5235 0.11 -0.2
227,531 + 13603 mRNA_5235 0.14 0.4
227,558 + 13603 mRNA_5235 0.14 0.1
227,675 - 13603 mRNA_5235 0.17 0.1
228,241 - 13603 mRNA_5235 0.28 0.3
228,267 + 13603 mRNA_5235 0.29 0.8
228,288 + 13603 mRNA_5235 0.29 -0.1
228,594 + 13603 mRNA_5235 0.35 -0.2
228,673 - 13603 mRNA_5235 0.37 0.6
229,118 + 13603 mRNA_5235 0.46 0.5
229,147 + 13603 mRNA_5235 0.46 1.3
229,392 - 13603 mRNA_5235 0.51 -0.9
229,730 + 13603 mRNA_5235 0.58 0.8
229,989 + 13603 mRNA_5235 0.63 0.8
230,309 + 13603 mRNA_5235 0.70 0.1
230,431 - 13603 mRNA_5235 0.72 -1.0
230,569 - 13603 mRNA_5235 0.75 0.5
231,026 + 13603 mRNA_5235 0.84 -0.2
231,028 - 13603 mRNA_5235 0.84 0.2
231,292 + 13603 mRNA_5235 0.90 0.2
231,329 + -0.4
231,401 + 0.4
231,730 + 1.4
231,736 + 1.4
231,862 + 0.8
231,863 + 0.9
231,869 - -1.1
231,876 - -0.6
231,894 - 0.5
232,012 - 0.2
232,185 - -0.1
232,190 + -0.8
232,200 - 13604 mRNA_5236 0.10 0.1
232,635 - 13604 mRNA_5236 0.34 -0.7
232,646 + 13604 mRNA_5236 0.34 -0.4
232,776 - 13604 mRNA_5236 0.41 0.5