Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5206

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5205: 13573 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 148303 to 148964 13573 mRNA_5206: 13574 - HMMPfam-Ubiquitin family-PF00240,ProSiteProfiles-Ubiquitin domain profile.-PS50053,SMART-Ubiquitin homologues-SM00213,SUPERFAMILY--SSF54236, at 149878 to 151168 13574

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
148,931 + 0.2
148,961 + -0.0
149,102 - 0.2
149,178 - -0.2
149,279 - 0.1
149,388 + 0.1
149,434 - -0.1
149,455 - 1.5
149,524 + -0.5
149,548 - 2.5
149,606 - 0.0
149,608 + 0.1
149,675 - 1.0
149,699 + 0.6
149,871 + -0.0
150,121 - 13574 mRNA_5206 0.19 0.2
150,219 + 13574 mRNA_5206 0.26 2.2
150,437 - 13574 mRNA_5206 0.43 -0.6
150,516 + 13574 mRNA_5206 0.49 0.3
150,543 - 13574 mRNA_5206 0.52 1.8
150,578 + 13574 mRNA_5206 0.54 0.8
150,654 - 13574 mRNA_5206 0.60 0.6
150,861 - 13574 mRNA_5206 0.76 0.9
151,003 - 13574 mRNA_5206 0.87 -0.0
151,269 - -0.4
151,280 + 0.5
151,285 + 0.3
151,835 + 0.1
151,981 + 0.1
152,026 + 0.2