Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5148

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5148: 13516 - K17918 SNX3_12 sorting nexin-3/12, at 17697 to 18440 13516 mRNA_5149: 13517 - Hypothetical Protein, at 18880 to 20047 13517

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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16,710 + 0.4
16,716 + 1.2
16,791 + 0.3
16,949 - -0.2
16,966 - 0.6
16,973 + -0.1
16,983 + -0.1
16,985 + 1.1
16,986 + 0.0
16,988 + -0.0
16,989 - 0.1
16,992 + -0.1
16,994 - -0.9
16,997 + 0.1
17,006 + -0.4
17,026 + 0.3
17,117 - -0.9
17,123 - 0.8
17,151 + 0.9
17,284 - 0.3
17,285 + -0.9
17,370 - -0.3
17,425 + 1.1
17,716 - -0.3
17,724 + -0.4
17,862 + 13516 mRNA_5148 0.22 1.5
17,873 + 13516 mRNA_5148 0.24 0.6
17,973 + 13516 mRNA_5148 0.37 -0.4
18,229 + 13516 mRNA_5148 0.72 -0.2
18,306 + 13516 mRNA_5148 0.82 -0.8
18,445 + -0.1
18,531 + 0.6
18,594 - 1.8
18,604 + 0.8
18,622 + 1.4
18,726 + -0.0
18,769 + 0.3
18,917 + -0.4
18,926 - 0.2
18,987 - -0.8
19,031 + 13517 mRNA_5149 0.13 0.4
19,047 - 13517 mRNA_5149 0.14 0.5
19,051 + 13517 mRNA_5149 0.15 -0.7
19,051 + 13517 mRNA_5149 0.15 -0.2
19,054 - 13517 mRNA_5149 0.15 0.6
19,060 + 13517 mRNA_5149 0.15 1.0
19,178 - 13517 mRNA_5149 0.26 0.2
19,187 - 13517 mRNA_5149 0.26 0.7
19,194 + 13517 mRNA_5149 0.27 0.3
19,204 + 13517 mRNA_5149 0.28 1.9
19,209 + 13517 mRNA_5149 0.28 0.3
19,351 + 13517 mRNA_5149 0.40 -0.1
19,369 - 13517 mRNA_5149 0.42 1.2