Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5084

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5083: 13451 - Hypothetical Protein, at 1709855 to 1711486 13451 mRNA_5084: 13452 - Hypothetical Protein, at 1712081 to 1713113 13452 mRNA_5085: 13453 - K03114 SWE1 mitosis inhibitor protein kinase SWE1, at 1713575 to 1718453 13453

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,711,091 + 13451 mRNA_5083 0.76 -0.2
1,711,209 - 13451 mRNA_5083 0.83 1.0
1,711,389 - 0.6
1,711,515 - 0.7
1,711,674 - 0.5
1,711,676 - 1.1
1,711,679 + 0.7
1,711,682 - -0.0
1,711,683 + 0.2
1,711,687 + -0.2
1,711,689 - 0.2
1,711,689 + -0.9
1,711,698 + -0.0
1,711,701 + 1.6
1,711,722 + 1.4
1,711,840 - 0.9
1,711,845 - 0.3
1,711,973 - -0.6
1,712,114 + 0.1
1,712,263 - 13452 mRNA_5084 0.18 0.5
1,712,420 + 13452 mRNA_5084 0.33 0.1
1,712,581 + 13452 mRNA_5084 0.48 0.5
1,712,714 + 13452 mRNA_5084 0.61 0.6
1,712,720 + 13452 mRNA_5084 0.62 1.8
1,712,878 + 13452 mRNA_5084 0.77 -0.7
1,713,015 - -0.2
1,713,164 + -0.5
1,713,170 - -0.6
1,713,178 + 0.2
1,713,182 - -1.8
1,713,185 + 0.5
1,713,375 - -0.0