Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4993

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4992: 13360 - Hypothetical Protein, at 1492258 to 1494685 13360 mRNA_4993: 13361 - K20660 CYP709 cytochrome P450, family 709, at 1494883 to 1497041 13361 mRNA_4994: 13362 - K09568 FKBP1 FK506-binding protein 1, at 1497335 to 1498309 13362

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,494,150 - 13360 mRNA_4992 0.78 0.6
1,494,766 + 0.1
1,495,746 - 13361 mRNA_4993 0.40 -0.8
1,496,221 + 13361 mRNA_4993 0.62 0.2
1,496,964 + -0.3
1,496,965 + -0.5
1,497,086 - -1.8
1,497,114 - -0.3
1,497,123 + 0.4
1,497,126 + 0.3
1,497,214 + 0.6
1,497,394 - 1.1
1,497,518 - 13362 mRNA_4994 0.19 0.3
1,497,522 - 13362 mRNA_4994 0.19 0.9
1,497,524 - 13362 mRNA_4994 0.19 2.1
1,497,707 + 13362 mRNA_4994 0.38 0.2
1,497,879 - 13362 mRNA_4994 0.56 0.1