Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4972

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4971: 13339 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 1447089 to 1449047 13339 mRNA_4972: 13340 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 1449962 to 1451515 13340 mRNA_4973: 13341 - K18466 VPS26 vacuolar protein sorting-associated protein 26, at 1451904 to 1453549 13341

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,449,715 - 1.6
1,449,827 + 0.8
1,449,880 + 0.6
1,450,324 - 13340 mRNA_4972 0.23 -0.2
1,450,439 - 13340 mRNA_4972 0.31 0.5
1,450,717 - 13340 mRNA_4972 0.49 0.9
1,450,990 - 13340 mRNA_4972 0.66 -0.2
1,451,156 - 13340 mRNA_4972 0.77 0.6
1,451,193 - 13340 mRNA_4972 0.79 1.0
1,451,207 - 13340 mRNA_4972 0.80 0.4
1,451,282 - 13340 mRNA_4972 0.85 0.1
1,451,318 + 13340 mRNA_4972 0.87 -0.6
1,451,525 + -0.3
1,451,530 - 1.3
1,451,558 - 0.7
1,451,715 + 0.1
1,451,729 + 0.7
1,451,870 + -1.0