Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4905

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4904: 13272 - K00367 narB ferredoxin-nitrate reductase, at 1266419 to 1270865 13272 mRNA_4905: 13273 - KOG2371 Molybdopterin biosynthesis protein, at 1271158 to 1273410 13273 mRNA_4906: 13274 - K03540 RPR2, RPP21 ribonuclease P protein subunit RPR2, at 1273469 to 1274303 13274

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,270,208 + 13272 mRNA_4904 0.85 2.3
1,270,467 - 0.1
1,270,752 - 1.2
1,270,761 - -0.0
1,270,769 + 1.3
1,270,871 - 0.3
1,270,939 - 0.3
1,270,957 + 0.3
1,270,961 - -0.0
1,270,961 + 0.5
1,270,971 - 1.0
1,270,981 + 0.9
1,271,024 + 0.5
1,271,028 + -0.4
1,271,038 + 2.1
1,271,075 + -2.0
1,271,085 - 0.3
1,271,202 + -0.2
1,271,215 - -0.1
1,271,782 + 13273 mRNA_4905 0.28 0.5
1,271,806 - 13273 mRNA_4905 0.29 0.0
1,271,839 + 13273 mRNA_4905 0.30 -0.0
1,271,964 - 13273 mRNA_4905 0.36 0.7
1,272,107 - 13273 mRNA_4905 0.42 0.3
1,272,428 + 13273 mRNA_4905 0.56 -0.0
1,272,688 + 13273 mRNA_4905 0.68 1.1
1,272,691 - 13273 mRNA_4905 0.68 -0.2
1,272,768 - 13273 mRNA_4905 0.71 -0.5
1,273,079 + 13273 mRNA_4905 0.85 0.1
1,273,499 - -1.0
1,274,371 + -0.9
1,274,392 + 0.3