Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4821

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4820: 13188 - Hypothetical Protein, at 1088296 to 1089046 13188 mRNA_4821: 13189 - HMMPfam-Arylsulfotransferase (ASST)-PF14269, at 1089374 to 1091580 13189 mRNA_4822: 13190 - K13800 CMPK1, UMPK UMP-CMP kinase, at 1092248 to 1093445 13190

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,088,540 + 13188 mRNA_4820 0.32 -0.0
1,088,549 - 13188 mRNA_4820 0.34 0.7
1,088,559 + 13188 mRNA_4820 0.35 1.2
1,088,719 - 13188 mRNA_4820 0.56 0.2
1,088,842 + 13188 mRNA_4820 0.73 -0.1
1,088,880 + 13188 mRNA_4820 0.78 -0.0
1,089,006 + 0.1
1,089,023 - -0.1
1,089,568 - -0.0
1,089,774 - 13189 mRNA_4821 0.18 1.1
1,089,884 - 13189 mRNA_4821 0.23 0.2
1,090,463 + 13189 mRNA_4821 0.49 -1.4
1,090,655 + 13189 mRNA_4821 0.58 0.2
1,090,690 - 13189 mRNA_4821 0.60 -0.6
1,090,738 - 13189 mRNA_4821 0.62 1.6
1,091,315 + 13189 mRNA_4821 0.88 0.7
1,091,324 + 13189 mRNA_4821 0.88 0.5
1,091,471 + -0.8
1,091,493 + -0.2
1,091,496 + 0.3
1,091,506 - 2.2
1,091,514 + 0.2
1,091,598 - 0.2
1,091,612 - -0.7
1,091,631 - -0.9
1,091,632 + 0.1
1,091,656 + 1.8
1,091,759 - 0.5
1,091,771 - 0.3
1,091,797 + -1.2
1,091,800 + 1.0
1,091,803 - 1.4
1,091,941 + 0.1
1,092,233 - 1.1