Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4818

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4817: 13185 - K09966 K09966 uncharacterized protein, at 1082768 to 1083677 13185 mRNA_4818: 13186 - BLAST Putative BTB domain transcription factor [Penicillium..., at 1083889 to 1085359 13186 mRNA_4819: 13187 - Hypothetical Protein, at 1085676 to 1087276 13187

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,083,078 - 13185 mRNA_4817 0.34 0.4
1,083,103 - 13185 mRNA_4817 0.37 -0.3
1,083,210 - 13185 mRNA_4817 0.49 0.2
1,083,503 + 13185 mRNA_4817 0.81 0.1
1,083,821 + 0.6
1,084,016 - 0.9
1,084,420 - 13186 mRNA_4818 0.36 -0.1
1,084,426 + 13186 mRNA_4818 0.37 0.1
1,084,500 - 13186 mRNA_4818 0.42 0.8
1,084,550 - 13186 mRNA_4818 0.45 -0.3
1,084,728 + 13186 mRNA_4818 0.57 0.6
1,084,809 - 13186 mRNA_4818 0.63 0.4
1,085,154 + 13186 mRNA_4818 0.86 2.7
1,085,402 + 0.7
1,085,463 - 0.7
1,085,473 + 0.6
1,085,598 + 0.3
1,085,609 - -0.2
1,085,910 + 13187 mRNA_4819 0.15 0.8
1,086,199 - 13187 mRNA_4819 0.33 -0.3
1,086,334 - 13187 mRNA_4819 0.41 0.1