Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4784

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4783: 13151 - Hypothetical Protein, at 1003364 to 1007134 13151 mRNA_4784: 13152 - BLAST calmodulin-like protein [Mycena chlorophos], at 1008050 to 1008769 13152 mRNA_4785: 13153 - KOG1577 Aldo/keto reductase family proteins, at 1009079 to 1010386 13153

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,007,066 - -0.6
1,007,073 - 0.7
1,007,076 - -0.0
1,007,082 + 1.3
1,007,097 - -0.9
1,007,110 + 1.2
1,007,211 + 0.7
1,007,261 - 0.2
1,007,400 + 0.3
1,007,414 - 0.2
1,007,430 + -0.0
1,007,483 - 0.2
1,007,664 - 0.5
1,007,677 + 0.7
1,007,684 - 0.1
1,007,700 - -0.1
1,007,716 - 0.4
1,007,732 - 0.3
1,007,845 + 0.5
1,008,134 - 13152 mRNA_4784 0.12 0.4
1,008,416 - 13152 mRNA_4784 0.51 1.8
1,008,712 - -0.4
1,008,730 - 1.5
1,008,998 - 1.0
1,009,007 - 0.1
1,009,040 + -0.0
1,009,302 - 13153 mRNA_4785 0.17 0.6
1,009,307 - 13153 mRNA_4785 0.17 0.3
1,009,315 - 13153 mRNA_4785 0.18 -0.6
1,009,330 - 13153 mRNA_4785 0.19 -1.0
1,009,731 + 13153 mRNA_4785 0.50 1.0