Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4762

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4762: 13130 - HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180, at 946790 to 947960 13130 mRNA_4763: 13131 - KOG1263 Multicopper oxidases, at 948670 to 952404 13131

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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945,832 - -0.3
945,837 - 1.0
945,842 + 0.1
946,099 - 2.4
946,168 + 0.8
946,173 + 1.0
946,292 - 0.2
946,445 - -0.7
946,516 + -2.0
946,549 - -2.0
946,746 + 1.8
947,222 - 13130 mRNA_4762 0.37 -0.3
947,224 - 13130 mRNA_4762 0.37 1.0
947,679 - 13130 mRNA_4762 0.76 0.6
947,858 + 1.1
948,115 - 0.4
948,136 - 1.1
948,187 + 1.2
948,188 + 0.7
948,292 - 0.5
948,426 - 1.4
948,458 + 0.3
948,584 + 0.4