Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4757

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4756: 13124 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047, at 935432 to 936982 13124 mRNA_4757: 13125 - Hypothetical Protein, at 937399 to 937793 13125 mRNA_4758: 13126 - HMMPfam-Autophagy-related protein 27-PF09451,SUPERFAMILY--SSF50911, at 938067 to 939280 13126

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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936,534 - 13124 mRNA_4756 0.71 0.1
936,845 + 0.3
937,028 - 1.1
937,144 + 1.3
937,218 - 0.7
937,242 - 0.7
937,534 - 13125 mRNA_4757 0.34 -0.5
937,538 + 13125 mRNA_4757 0.35 -0.6
937,549 - 13125 mRNA_4757 0.38 0.4
937,550 + 13125 mRNA_4757 0.38 2.1
937,632 - 13125 mRNA_4757 0.59 -0.5
937,689 - 13125 mRNA_4757 0.73 0.3
937,704 + 13125 mRNA_4757 0.77 -0.1
937,712 + 13125 mRNA_4757 0.79 2.0
937,729 + 13125 mRNA_4757 0.84 -0.5
937,729 + 13125 mRNA_4757 0.84 -0.3
937,736 - 13125 mRNA_4757 0.85 -0.1
937,746 + 13125 mRNA_4757 0.88 1.3
937,765 - 1.9
937,768 - 1.5
937,873 - -0.1
937,892 - 0.4
937,897 + -0.4
937,908 + -0.6
937,910 + 0.7
937,918 + -0.1
938,179 + 0.2
938,200 - 13126 mRNA_4758 0.11 0.5
938,207 + 13126 mRNA_4758 0.12 0.5
938,297 - 13126 mRNA_4758 0.19 0.3
938,365 + 13126 mRNA_4758 0.25 0.1
938,487 - 13126 mRNA_4758 0.35 -0.2
938,694 + 13126 mRNA_4758 0.52 0.9