Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4726

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4725: 13093 - Hypothetical Protein, at 865355 to 866563 13093 mRNA_4726: 13094 - KOG3214 Uncharacterized Zn ribbon-containing protein, at 866956 to 867873 13094 mRNA_4727: 13095 - Hypothetical Protein, at 868153 to 868831 13095

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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865,974 - 13093 mRNA_4725 0.51 -0.2
865,984 + 13093 mRNA_4725 0.52 0.9
866,002 + 13093 mRNA_4725 0.54 -0.6
866,142 + 13093 mRNA_4725 0.65 0.3
866,576 + 0.1
866,711 + 0.1
866,721 - 0.1
866,733 - 0.2
866,844 - 0.8
866,846 - 0.8
866,854 + -0.1
866,870 + 1.9
866,876 + 2.5
866,877 + 0.4
867,012 - 0.0
867,027 + 0.5
867,092 - 13094 mRNA_4726 0.15 -0.6
867,148 - 13094 mRNA_4726 0.21 0.7
867,150 - 13094 mRNA_4726 0.21 -0.0
867,156 + 13094 mRNA_4726 0.22 0.8
867,434 + 13094 mRNA_4726 0.52 0.5
867,445 - 13094 mRNA_4726 0.53 -0.7
867,448 + 13094 mRNA_4726 0.54 0.3
867,468 + 13094 mRNA_4726 0.56 1.1
867,554 - 13094 mRNA_4726 0.65 -0.2
867,867 - 1.3
867,880 - -0.5
867,923 - -0.9
868,012 - 0.2
868,303 + 13095 mRNA_4727 0.22 0.0
868,448 + 13095 mRNA_4727 0.43 0.3
868,595 + 13095 mRNA_4727 0.65 1.1
868,598 + 13095 mRNA_4727 0.66 0.2
868,608 - 13095 mRNA_4727 0.67 -0.2
868,615 - 13095 mRNA_4727 0.68 0.0
868,719 - 13095 mRNA_4727 0.83 1.8
868,727 - 13095 mRNA_4727 0.85 1.5
868,799 + 0.3
868,864 - -1.1
868,873 - -0.0