Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4674

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4673: 13041 - K01069 E3.1.2.6, gloB hydroxyacylglutathione hydrolase, at 743886 to 745346 13041 mRNA_4674: 13042 - K08150 SLC2A13, ITR MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13, at 745872 to 747839 13042 mRNA_4675: 13043 - SUPERFAMILY--SSF53448, at 748031 to 749259 13043

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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744,954 + 13041 mRNA_4673 0.73 0.7
744,966 + 13041 mRNA_4673 0.74 -0.2
745,219 - 0.3
745,228 + 1.2
745,295 + -1.2
745,330 - 0.4
745,362 - 0.6
745,409 - 0.3
745,414 - -0.2
745,415 - 1.1
745,419 - -0.2
745,420 - 0.6
745,421 + 1.0
745,421 + 0.7
745,424 + -0.3
745,428 - -0.0
745,432 + 0.9
745,434 - 0.1
745,437 + -0.2
745,450 - 1.1
745,455 + -0.2
745,456 - -0.2
745,496 - 1.1
745,502 + -0.0
745,552 + 0.5
745,562 + 0.0
745,569 + -0.0
745,574 - -0.2
745,581 - 0.0
745,585 + 0.0
745,591 + 0.4
745,654 - 1.2
745,714 - 0.1
745,717 - -0.3
745,733 + 0.1
745,734 + 1.1
745,756 + 0.5
745,774 + 1.1
745,904 - -0.1
745,905 - 0.4
746,216 + 13042 mRNA_4674 0.17 1.2
746,652 + 13042 mRNA_4674 0.40 -0.5
746,801 - 13042 mRNA_4674 0.47 0.9
747,233 - 13042 mRNA_4674 0.69 0.3
747,384 + 13042 mRNA_4674 0.77 0.5
747,499 + 13042 mRNA_4674 0.83 -0.8
747,684 + 0.0
747,815 + 0.7
747,839 + 0.7