Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4671

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4670: 13038 - Hypothetical Protein, at 738816 to 739415 13038 mRNA_4671: 13039 - Hypothetical Protein, at 739616 to 741558 13039 mRNA_4672: 13040 - K11979 UBR7 E3 ubiquitin-protein ligase UBR7, at 742031 to 743506 13040

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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738,994 + 13038 mRNA_4670 0.30 0.7
739,168 + 13038 mRNA_4670 0.59 2.1
739,343 - 13038 mRNA_4670 0.88 -0.8
739,460 - 1.3
739,481 - -0.3
739,609 + 1.1
739,730 - -0.6
739,743 + 0.4
739,758 + 0.9
740,179 - 13039 mRNA_4671 0.29 0.3
740,487 - 13039 mRNA_4671 0.45 0.8
740,963 + 13039 mRNA_4671 0.69 0.8
741,796 - 0.8
741,822 - -0.6
741,931 + 1.7
741,943 - -0.6
741,962 + -0.6
741,963 - -0.4
742,115 - 0.4
742,123 + 2.1
742,135 + 0.7
742,405 - 13040 mRNA_4672 0.25 1.0
742,544 - 13040 mRNA_4672 0.35 1.6