Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4658

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4657: 13025 - Hypothetical Protein, at 704703 to 705380 13025 mRNA_4658: 13026 - Hypothetical Protein, at 705825 to 708792 13026 mRNA_4659: 13027 - KOG1134 Uncharacterized conserved protein, at 709545 to 713167 13027

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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704,848 + 13025 mRNA_4657 0.21 -0.1
705,128 - 13025 mRNA_4657 0.63 0.1
705,134 + 13025 mRNA_4657 0.64 0.8
705,148 - 13025 mRNA_4657 0.66 1.7
705,160 + 13025 mRNA_4657 0.67 0.6
705,565 - 0.9
705,580 - 1.7
705,580 + -0.2
705,584 + 1.6
705,585 + 1.0
705,585 + 1.0
705,586 - 1.0
705,618 + 0.1
705,626 + -0.0
705,705 + 1.0
705,709 - 0.5
705,724 - 0.0
705,746 + 0.6
705,752 - 0.1
705,804 - -0.5
705,842 - 0.4
705,865 + 0.6
705,865 + 0.3
705,873 + -0.8
706,034 - 0.2
706,139 + 13026 mRNA_4658 0.11 2.0
706,158 - 13026 mRNA_4658 0.11 0.5
706,177 + 13026 mRNA_4658 0.12 0.7
706,328 + 13026 mRNA_4658 0.17 0.8
706,577 - 13026 mRNA_4658 0.25 0.8
706,588 - 13026 mRNA_4658 0.26 -0.1
706,604 + 13026 mRNA_4658 0.26 1.0
706,611 + 13026 mRNA_4658 0.26 0.0
706,622 + 13026 mRNA_4658 0.27 2.4
706,625 + 13026 mRNA_4658 0.27 0.1
706,627 + 13026 mRNA_4658 0.27 0.3
706,743 + 13026 mRNA_4658 0.31 0.8
706,753 + 13026 mRNA_4658 0.31 0.5
706,755 + 13026 mRNA_4658 0.31 0.8
706,756 - 13026 mRNA_4658 0.31 1.4
706,759 - 13026 mRNA_4658 0.31 -0.0
706,777 - 13026 mRNA_4658 0.32 -0.3
706,777 - 13026 mRNA_4658 0.32 1.9
706,911 + 13026 mRNA_4658 0.37 -0.2
706,912 - 13026 mRNA_4658 0.37 0.9
706,913 - 13026 mRNA_4658 0.37 2.0
706,941 + 13026 mRNA_4658 0.38 0.2
707,055 + 13026 mRNA_4658 0.41 0.1
707,064 + 13026 mRNA_4658 0.42 -0.6
707,064 + 13026 mRNA_4658 0.42 0.2
707,066 + 13026 mRNA_4658 0.42 0.0
707,388 - 13026 mRNA_4658 0.53 0.8
707,518 + 13026 mRNA_4658 0.57 -0.3
707,627 - 13026 mRNA_4658 0.61 0.3
707,659 + 13026 mRNA_4658 0.62 0.1
707,788 + 13026 mRNA_4658 0.66 -0.4
707,950 + 13026 mRNA_4658 0.72 0.5
708,063 - 13026 mRNA_4658 0.75 -0.2
708,068 - 13026 mRNA_4658 0.76 2.0
708,238 - 13026 mRNA_4658 0.81 -0.4
708,269 + 13026 mRNA_4658 0.82 -0.9
708,360 + 13026 mRNA_4658 0.85 0.2
708,378 - 13026 mRNA_4658 0.86 -1.0
708,512 - 0.1
708,527 + -0.3
708,664 + 0.5
708,686 + 0.3
708,763 - 0.4
708,859 - -0.7
708,962 + 0.4
708,971 - -0.2
708,971 - 0.7
708,977 + 0.1
708,982 + -1.3
708,984 - -0.1
708,993 - 0.2
708,995 + -0.8
708,995 - 0.4
708,995 - 0.6
708,996 - 0.2
708,998 + 0.9
709,007 + 0.1
709,011 + 1.3
709,022 + 0.5
709,028 + -0.3
709,047 + -0.2
709,055 + 0.5
709,061 - 1.8
709,062 + 1.4
709,077 - -0.2
709,077 - 0.1
709,079 + 0.7
709,082 - 0.7
709,104 - 1.4
709,115 + 1.8
709,117 + 1.4
709,119 - 0.5
709,120 + 0.1
709,125 - -0.4
709,128 + 1.4
709,137 - 0.6
709,146 + 1.5
709,187 - 0.7
709,192 + 1.6
709,207 + 0.0
709,207 - 0.5
709,214 + 1.5
709,219 - -0.2
709,219 + 1.4
709,224 + 0.7
709,226 + -0.3
709,230 + 1.3
709,231 - 0.1
709,254 - 0.5
709,256 - -0.3
709,258 + 0.7
709,259 + 0.5
709,261 - -0.4
709,261 - 0.4
709,267 + 0.4
709,267 - 1.3
709,268 + 1.0
709,268 + 0.3
709,269 + 0.2
709,275 + 1.1
709,278 - -0.1
709,279 - 0.1
709,288 - 0.3
709,289 + 0.4
709,289 + -0.7
709,294 + 0.6
709,295 - 0.8
709,305 + -0.0
709,306 - -0.2
709,307 - 0.6
709,310 - 1.7
709,311 - -0.7
709,312 + 1.4
709,336 + 0.4
709,419 - 0.1
709,452 - 0.6