Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4585

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4584: 12952 - KOG2217 U4/U6.U5 snRNP associated protein, at 522461 to 526317 12952 mRNA_4585: 12953 - SUPERFAMILY--SSF103473, at 526497 to 528503 12953 mRNA_4586: 12954 - K16075 MRS2, MFM1 magnesium transporter, at 528737 to 530080 12954

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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525,528 + 12952 mRNA_4584 0.80 0.9
525,820 + 12952 mRNA_4584 0.87 0.1
525,974 + 0.2
526,107 + -0.1
526,114 + 0.7
526,115 + 1.5
526,250 - 0.1
526,264 + 0.3
526,388 - 1.2
526,395 + 0.5
526,411 + 0.9
526,421 + 0.4
526,524 + 0.1
526,715 + 12953 mRNA_4585 0.11 0.6
526,863 - 12953 mRNA_4585 0.18 -0.3
527,146 - 12953 mRNA_4585 0.32 1.3
527,481 + 12953 mRNA_4585 0.49 1.2
527,576 - 12953 mRNA_4585 0.54 0.2
528,611 - -1.1
528,647 + 1.4
528,652 + 1.9
528,899 - 12954 mRNA_4586 0.12 0.3
528,906 + 12954 mRNA_4586 0.13 0.6
529,200 + 12954 mRNA_4586 0.34 0.4
529,335 + 12954 mRNA_4586 0.44 -0.6