Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4530

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4530: 12898 - K00605 gcvT, AMT aminomethyltransferase, at 393210 to 395082 12898 mRNA_4531: 12899 - K03671 trxA thioredoxin 1, at 395175 to 396195 12899

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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392,813 - 0.4
392,840 - 1.2
392,907 + 0.1
392,974 - 1.0
392,984 - 1.2
392,999 - -0.1
393,125 - 0.6
393,139 - 0.6
393,149 + 0.4
393,155 + -0.2
393,164 + 1.9
393,228 + 2.7
393,258 + 0.4
393,289 - 0.4
393,449 + 12898 mRNA_4530 0.13 0.5
393,860 - 12898 mRNA_4530 0.35 1.0
394,722 + 12898 mRNA_4530 0.81 0.3
394,898 + 0.8
395,059 + -0.5
395,465 - 12899 mRNA_4531 0.28 0.3
395,500 + 12899 mRNA_4531 0.32 0.2
395,520 - 12899 mRNA_4531 0.34 0.8
395,952 + 12899 mRNA_4531 0.76 -1.3