Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4476

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4475: 12843 - K05917 CYP51 sterol 14-demethylase, at 271874 to 274192 12843 mRNA_4476: 12844 - HMMPfam-Domain of unknown function (DUF543)-PF04418, at 274456 to 275559 12844 mRNA_4477: 12845 - HMMPfam-CFEM domain-PF05730,SMART--SM00747, at 276130 to 277462 12845

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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274,240 - 1.1
274,354 - 0.0
274,516 - 0.3
274,545 + 1.7
274,555 - 1.0
274,560 - -1.2
274,568 + 12844 mRNA_4476 0.10 1.5
274,651 + 12844 mRNA_4476 0.18 1.7
274,835 + 12844 mRNA_4476 0.34 0.5
274,985 + 12844 mRNA_4476 0.48 0.0
274,998 + 12844 mRNA_4476 0.49 0.9
275,126 + 12844 mRNA_4476 0.61 1.0
275,150 + 12844 mRNA_4476 0.63 0.6
275,430 + 12844 mRNA_4476 0.88 0.2
275,440 - 12844 mRNA_4476 0.89 0.2
275,544 - 0.5
275,593 + -1.6
275,601 + -0.8
275,601 - 0.8
275,920 - 1.4