Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4469

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4468: 12836 - K11866 STAMBP, AMSH STAM-binding protein, at 252215 to 253594 12836 mRNA_4469: 12837 - Hypothetical Protein, at 253897 to 255507 12837 mRNA_4470: 12838 - K05292 PIGT phosphatidylinositol glycan, class T, at 255983 to 257580 12838

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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253,518 - 0.7
253,610 + 1.1
253,610 - -0.2
253,649 + 0.5
253,777 + 0.4
253,843 - 0.7
254,575 - 12837 mRNA_4469 0.42 1.2
254,591 - 12837 mRNA_4469 0.43 -1.0
254,685 - 12837 mRNA_4469 0.49 1.7
254,696 + 12837 mRNA_4469 0.50 0.1
254,741 + 12837 mRNA_4469 0.52 -0.1
254,863 - 12837 mRNA_4469 0.60 0.6
254,874 + 12837 mRNA_4469 0.61 0.3
254,994 + 12837 mRNA_4469 0.68 -0.0
255,188 + 12837 mRNA_4469 0.80 0.1
255,258 - 12837 mRNA_4469 0.84 -0.8
255,259 - 12837 mRNA_4469 0.85 1.3
255,265 - 12837 mRNA_4469 0.85 0.3
255,283 + 12837 mRNA_4469 0.86 -0.7
255,431 - -1.4
255,436 - -0.1
255,436 + -0.1
255,449 - -0.1
255,449 - 0.1
255,592 - 0.2
255,676 + -0.3
255,721 + -0.1
255,901 + 0.6
255,902 + -0.9
255,907 + 0.0
256,022 - 1.5