Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4442

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4441: 12809 - SUPERFAMILY--SSF52047, at 187082 to 188392 12809 mRNA_4442: 12810 - SUPERFAMILY--SSF52047, at 188576 to 190157 12810 mRNA_4443: 12811 - SUPERFAMILY--SSF52047, at 190783 to 192210 12811

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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187,745 - 12809 mRNA_4441 0.51 0.6
187,930 + 12809 mRNA_4441 0.65 0.7
187,960 + 12809 mRNA_4441 0.67 1.7
188,045 - 12809 mRNA_4441 0.73 0.1
188,052 + 12809 mRNA_4441 0.74 0.8
188,175 - 12809 mRNA_4441 0.83 -0.1
188,176 + 12809 mRNA_4441 0.83 -0.0
188,394 + -0.0
188,490 + 0.6
188,500 - -0.1
188,522 + 0.6
188,641 - 0.2
188,659 + -0.0
188,666 - -0.2
188,669 + -0.0
188,829 + 12810 mRNA_4442 0.16 0.3
188,920 - 12810 mRNA_4442 0.22 0.7
188,990 + 12810 mRNA_4442 0.26 0.4
189,045 - 12810 mRNA_4442 0.30 -0.3
189,051 + 12810 mRNA_4442 0.30 0.3
189,108 + 12810 mRNA_4442 0.34 0.0
189,231 + 12810 mRNA_4442 0.41 0.8
189,264 - 12810 mRNA_4442 0.43 0.2
189,375 + 12810 mRNA_4442 0.51 2.5
189,382 - 12810 mRNA_4442 0.51 -0.5
189,538 - 12810 mRNA_4442 0.61 0.8
189,545 + 12810 mRNA_4442 0.61 0.4
189,768 - 12810 mRNA_4442 0.75 -0.8
190,430 + 0.3
190,442 + -0.2
190,529 - -0.0
190,540 - 1.6
190,546 - 0.5
190,549 + -0.2
190,686 - 0.2
190,701 + 1.1