Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4382

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4381: 12749 - BLAST glycosyltransferase family 25 [Puccinia cf. psidii AE..., at 59708 to 61504 12749 mRNA_4382: 12750 - Hypothetical Protein, at 61848 to 63283 12750 mRNA_4383: 12751 - Hypothetical Protein, at 63561 to 65177 12751

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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60,879 + 12749 mRNA_4381 0.65 0.2
61,044 + 12749 mRNA_4381 0.74 0.4
61,057 - 12749 mRNA_4381 0.75 0.5
61,173 + 12749 mRNA_4381 0.82 0.4
61,200 - 12749 mRNA_4381 0.83 1.9
61,299 - 12749 mRNA_4381 0.89 0.4
61,304 - 12749 mRNA_4381 0.89 -0.4
61,603 + -0.7
61,629 - 0.9
61,633 - 1.5
62,159 - 12750 mRNA_4382 0.22 -1.1
62,785 - 12750 mRNA_4382 0.65 -0.1
62,792 + 12750 mRNA_4382 0.66 0.9
63,062 + 12750 mRNA_4382 0.85 0.5
63,066 - 12750 mRNA_4382 0.85 0.2
63,067 + 12750 mRNA_4382 0.85 0.3
63,071 - 12750 mRNA_4382 0.85 0.1
63,130 - 12750 mRNA_4382 0.89 -0.0
63,207 - 0.2
63,354 + 0.1
63,394 - 0.3
63,394 - -0.9
63,498 - 0.4
63,510 - 0.9
63,516 + 0.1
63,516 + -0.1
63,531 + 0.1
63,953 + 12751 mRNA_4383 0.24 0.7