Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4359

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4359: 12727 - Hypothetical Protein, at 194 to 736 12727 mRNA_4360: 12728 - Hypothetical Protein, at 964 to 3087 12728

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1 + 1.2
34 + 0.2
36 + 1.5
40 + 0.7
106 - 0.7
115 + 0.5
156 - 0.7
162 + 0.1
170 + 0.5
318 + 12727 mRNA_4359 0.23 0.7
397 + 12727 mRNA_4359 0.37 1.4
440 + 12727 mRNA_4359 0.45 0.2
450 + 12727 mRNA_4359 0.47 0.2
491 + 12727 mRNA_4359 0.55 0.9
494 - 12727 mRNA_4359 0.55 0.4
500 - 12727 mRNA_4359 0.56 0.2
513 + 12727 mRNA_4359 0.59 -0.1
527 - 12727 mRNA_4359 0.61 0.7
535 + 12727 mRNA_4359 0.63 0.3
537 - 12727 mRNA_4359 0.63 0.3
573 - 12727 mRNA_4359 0.70 0.9
575 - 12727 mRNA_4359 0.70 1.2
575 - 12727 mRNA_4359 0.70 0.0
585 + 12727 mRNA_4359 0.72 0.3
627 - 12727 mRNA_4359 0.80 1.0
629 + 12727 mRNA_4359 0.80 0.7
632 + 12727 mRNA_4359 0.81 -0.3
655 + 12727 mRNA_4359 0.85 0.8
657 - 12727 mRNA_4359 0.85 0.0
666 + 12727 mRNA_4359 0.87 0.2
837 + -0.5
866 + 1.1
966 + -0.2
1,080 + -0.6
1,091 + 0.2
1,091 + 0.4
1,092 + 0.2
1,119 + -0.6
1,180 - 12728 mRNA_4360 0.10 -0.4
1,185 - 12728 mRNA_4360 0.10 0.3
1,186 + 12728 mRNA_4360 0.10 -0.5
1,262 + 12728 mRNA_4360 0.14 0.5
1,362 + 12728 mRNA_4360 0.19 0.6
1,365 - 12728 mRNA_4360 0.19 0.3
1,368 - 12728 mRNA_4360 0.19 -0.1
1,381 + 12728 mRNA_4360 0.20 1.6
1,539 - 12728 mRNA_4360 0.27 1.1
1,589 + 12728 mRNA_4360 0.29 -0.2
1,630 + 12728 mRNA_4360 0.31 -0.1
1,688 + 12728 mRNA_4360 0.34 0.5
1,692 + 12728 mRNA_4360 0.34 1.2
1,698 - 12728 mRNA_4360 0.35 0.1
1,699 + 12728 mRNA_4360 0.35 0.6