Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4210

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4209: 12577 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 1615699 to 1618403 12577 mRNA_4210: 12578 - K19985 EXOC6, SEC15 exocyst complex component 6, at 1618796 to 1621938 12578 mRNA_4211: 12579 - Hypothetical Protein, at 1622119 to 1623170 12579

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,618,011 - 12577 mRNA_4209 0.85 1.3
1,618,038 + 12577 mRNA_4209 0.86 0.5
1,618,202 - 0.5
1,618,241 + 0.0
1,618,254 - 0.9
1,618,255 + -0.2
1,618,448 - 0.9
1,618,470 + 0.9
1,618,528 + 1.8
1,618,601 - -0.3
1,618,757 - 0.3
1,619,150 - 12578 mRNA_4210 0.11 0.7
1,619,391 + 12578 mRNA_4210 0.19 -0.5
1,620,237 + 12578 mRNA_4210 0.46 0.4
1,620,265 + 12578 mRNA_4210 0.47 0.6
1,620,546 - 12578 mRNA_4210 0.56 -0.1
1,620,570 - 12578 mRNA_4210 0.56 0.9
1,620,659 + 12578 mRNA_4210 0.59 0.6
1,620,957 - 12578 mRNA_4210 0.69 -2.5
1,620,977 + 12578 mRNA_4210 0.69 0.7
1,621,082 - 12578 mRNA_4210 0.73 -0.1
1,621,157 - 12578 mRNA_4210 0.75 -0.7
1,621,162 + 12578 mRNA_4210 0.75 0.3
1,621,165 - 12578 mRNA_4210 0.75 0.4
1,621,179 + 12578 mRNA_4210 0.76 1.2
1,621,326 + 12578 mRNA_4210 0.80 0.9
1,621,614 + 12578 mRNA_4210 0.90 0.5
1,621,690 - -0.8
1,621,709 - -0.1
1,621,806 + 1.2
1,622,022 - 0.1
1,622,028 + -0.0
1,622,829 - 12579 mRNA_4211 0.67 -0.7
1,622,830 + 12579 mRNA_4211 0.68 0.1