Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4194

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4193: 12561 - Hypothetical Protein, at 1580428 to 1584449 12561 mRNA_4194: 12562 - K01934 MTHFS 5-formyltetrahydrofolate cyclo-ligase, at 1584696 to 1585623 12562 mRNA_4195: 12563 - HMMPfam-Protein of unknown function (DUF2962)-PF11176, at 1585796 to 1586681 12563

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,584,080 - 1.7
1,584,231 + 1.4
1,584,499 - -1.3
1,584,516 + 0.2
1,584,635 + -0.5
1,584,643 + 0.3
1,584,654 - 0.8
1,584,665 + 1.6
1,584,681 + -0.3
1,584,682 - 1.7
1,584,683 + -0.0
1,584,812 - 12562 mRNA_4194 0.12 0.1
1,584,817 - 12562 mRNA_4194 0.13 0.6
1,584,929 - 12562 mRNA_4194 0.25 0.0
1,585,105 + 12562 mRNA_4194 0.44 -0.6
1,585,253 - 12562 mRNA_4194 0.60 -0.2
1,585,812 - -0.3