Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4182

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4181: 12549 - Hypothetical Protein, at 1551222 to 1553388 12549 mRNA_4182: 12550 - K13288 orn, REX2, REXO2 oligoribonuclease, at 1554161 to 1555375 12550 mRNA_4183: 12551 - K01497 ribA, RIB1 GTP cyclohydrolase II, at 1555526 to 1557851 12551

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,553,907 - 0.8
1,553,909 - 0.9
1,553,910 + 0.6
1,553,924 - 1.0
1,553,945 + 1.4
1,553,948 + 0.3
1,554,231 - 0.3
1,554,239 + 0.3
1,554,240 - 0.1
1,554,369 - 12550 mRNA_4182 0.17 1.0
1,554,513 - 12550 mRNA_4182 0.29 0.8
1,554,660 - 12550 mRNA_4182 0.41 0.5
1,554,819 - 12550 mRNA_4182 0.54 1.9
1,554,964 - 12550 mRNA_4182 0.66 1.2
1,555,151 - 12550 mRNA_4182 0.81 0.1
1,555,375 - 1.3