Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3958

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3957: 12325 - KOG0254 Predicted transporter (major facilitator superfamily), at 994846 to 997069 12325 mRNA_3958: 12326 - Hypothetical Protein, at 997210 to 999982 12326 mRNA_3959: 12327 - K10401 KIF18_19 kinesin family member 18/19, at 1000631 to 1004153 12327

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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996,212 - 12325 mRNA_3957 0.61 0.2
996,523 + 12325 mRNA_3957 0.75 -0.3
997,073 + 0.5
997,311 - 0.6
997,381 + 0.5
997,566 - 12326 mRNA_3958 0.13 0.1
997,701 + 12326 mRNA_3958 0.18 0.5
997,710 + 12326 mRNA_3958 0.18 1.7
997,845 - 12326 mRNA_3958 0.23 1.1
998,433 - 12326 mRNA_3958 0.44 0.9
998,524 - 12326 mRNA_3958 0.47 0.3
998,746 + 12326 mRNA_3958 0.55 1.4
998,887 + 12326 mRNA_3958 0.60 -0.4
999,419 - 12326 mRNA_3958 0.80 0.2
999,610 - 12326 mRNA_3958 0.87 0.0
999,753 + 0.8
999,889 + 0.0
999,905 - -0.6
1,000,159 - 0.0
1,000,198 - 0.3
1,000,649 + 0.8
1,000,652 + 1.3
1,000,791 + 0.7
1,000,950 - -1.2