Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3930

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3929: 12297 - BLAST TKL/TKL-ccin protein kinase [Mycena chlorophos], at 925744 to 929341 12297 mRNA_3930: 12298 - Hypothetical Protein, at 929708 to 931043 12298 mRNA_3931: 12299 - BLAST protein [Lichtheimia corymbifera JMRC-FSU-9682], at 931506 to 935642 12299

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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928,966 + 12297 mRNA_3929 0.90 0.2
929,190 - 0.6
929,339 + -1.3
929,509 + -0.8
929,762 - 1.6
929,838 + 0.3
929,933 + 12298 mRNA_3930 0.17 0.1
930,234 + 12298 mRNA_3930 0.39 0.4
930,240 + 12298 mRNA_3930 0.40 0.3
930,240 + 12298 mRNA_3930 0.40 -0.9
930,514 + 12298 mRNA_3930 0.60 0.9
930,527 + 12298 mRNA_3930 0.61 0.0
930,982 + 0.2
931,086 + 0.3
931,088 + 0.8
931,232 + 2.5
931,234 + 0.6
931,241 + 0.7
931,270 + 0.3
931,379 - -0.2
931,403 - -1.2
931,407 + 0.9
931,412 + -0.9
931,427 - -0.9
931,429 + 0.6
931,433 - 0.2
931,450 + 1.2
931,699 + -0.3
931,866 + 0.3
931,890 + 0.3
931,896 - -0.6
932,001 + 12299 mRNA_3931 0.12 0.2