Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3917

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3916: 12284 - K02736 PSMB4 20S proteasome subunit beta 7, at 892527 to 893886 12284 mRNA_3917: 12285 - KOG4479 Transcription factor e(y)2, at 894031 to 894594 12285 mRNA_3918: 12286 - KOG0024 Sorbitol dehydrogenase, at 895186 to 897368 12286

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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893,871 - 0.9
894,047 + 0.3
894,337 - 12285 mRNA_3917 0.54 0.3
894,437 - 12285 mRNA_3917 0.72 1.9
894,482 - 12285 mRNA_3917 0.80 1.9
894,780 + -0.6
894,794 - 0.4
894,915 - 1.0
895,072 + -0.0
895,203 - 0.7