Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3915

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3914: 12282 - HMMPfam-Domain of unknown function (DUF1708)-PF08101,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF48350, at 886816 to 890417 12282 mRNA_3915: 12283 - K01062 PLA2G7, PAFAH platelet-activating factor acetylhydrolase, at 890640 to 892402 12283 mRNA_3916: 12284 - K02736 PSMB4 20S proteasome subunit beta 7, at 892527 to 893886 12284

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
889,712 + 12282 mRNA_3914 0.80 0.2
890,070 - -0.8
890,269 - 0.9
890,311 + 0.4
890,361 - 0.2
890,423 + 0.3
890,445 - 0.5
890,517 - -0.9
890,725 - 1.5
891,737 + 12283 mRNA_3915 0.62 0.4
891,879 + 12283 mRNA_3915 0.70 -0.9
891,993 - 12283 mRNA_3915 0.77 1.9
892,288 + 0.6
892,303 + 0.2
892,447 - 0.2
892,463 + -2.1
892,478 - -0.1