Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3900

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3899: 12267 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 849422 to 850420 12267 mRNA_3900: 12268 - SUPERFAMILY--SSF55729, at 850598 to 851508 12268 mRNA_3901: 12269 - K00863 DAK, TKFC triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing), at 852096 to 854470 12269

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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849,792 - 12267 mRNA_3899 0.37 0.6
850,417 + -0.9
850,477 + 1.1
850,718 + 12268 mRNA_3900 0.13 0.0
851,030 + 12268 mRNA_3900 0.47 0.2
851,382 + 12268 mRNA_3900 0.86 0.1
851,620 - 0.8
851,865 + -0.5
851,873 - -0.4
851,927 - 0.9
852,069 + 0.6
852,171 - 0.8