Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3895

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3894: 12262 - SUPERFAMILY--SSF54695, at 842449 to 843578 12262 mRNA_3895: 12263 - Hypothetical Protein, at 844130 to 844681 12263 mRNA_3896: 12264 - BLAST F-box domain containing protein [Metarhizium maju..., at 844807 to 845932 12264

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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843,200 - 12262 mRNA_3894 0.66 -0.3
843,417 - 12262 mRNA_3894 0.86 1.1
843,474 + 0.2
843,479 - -0.1
843,481 + 0.2
843,481 + -0.3
843,606 - -0.6
843,621 - -0.3
843,623 - 0.0
843,627 + -0.3
843,647 - -0.7
843,723 - 1.0
843,747 - 0.4
843,757 - 0.5
843,908 - -0.2
843,941 + 0.3
844,047 - -0.4
844,055 - 0.6
844,056 + 0.4
844,071 + 0.5
844,143 + 0.3
844,198 + 12263 mRNA_3895 0.12 1.5
844,332 - 12263 mRNA_3895 0.37 1.3
844,340 + 12263 mRNA_3895 0.38 0.0
844,365 - 12263 mRNA_3895 0.43 0.3
844,370 - 12263 mRNA_3895 0.43 0.0
844,371 + 12263 mRNA_3895 0.44 0.1
844,385 + 12263 mRNA_3895 0.46 1.2
844,392 + 12263 mRNA_3895 0.47 0.8
844,410 - 12263 mRNA_3895 0.51 0.4
844,423 - 12263 mRNA_3895 0.53 -0.1
844,543 + 12263 mRNA_3895 0.75 0.1
844,665 - -0.4
844,671 - 0.7
844,678 + 0.4
844,699 + -0.1
844,708 + 0.0
844,709 + 1.7
844,711 - 0.3
844,713 + 1.1
845,136 - 12264 mRNA_3896 0.29 0.8
845,300 - 12264 mRNA_3896 0.44 -0.8
845,431 + 12264 mRNA_3896 0.55 0.1