Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3882

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3881: 12249 - Hypothetical Protein, at 814368 to 814862 12249 mRNA_3882: 12250 - Hypothetical Protein, at 815200 to 816864 12250 mRNA_3883: 12251 - K01784 galE, GALE UDP-glucose 4-epimerase, at 817567 to 820111 12251

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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814,304 + 0.7
814,305 - 0.1
814,316 + 0.2
814,317 - -0.0
814,320 - -0.1
814,333 + 0.6
814,334 + 0.1
814,356 + 0.6
814,386 - -0.1
814,398 - -0.1
814,402 - 0.7
814,405 + 1.0
814,421 - 12249 mRNA_3881 0.11 -0.2
814,422 + 12249 mRNA_3881 0.11 0.2
814,472 - 12249 mRNA_3881 0.21 0.5
814,477 + 12249 mRNA_3881 0.22 0.1
814,478 - 12249 mRNA_3881 0.22 0.8
814,492 - 12249 mRNA_3881 0.25 0.0
814,492 + 12249 mRNA_3881 0.25 -0.2
814,499 + 12249 mRNA_3881 0.26 0.4
814,506 - 12249 mRNA_3881 0.28 0.5
814,529 - 12249 mRNA_3881 0.33 -1.5
814,539 + 12249 mRNA_3881 0.35 0.9
814,582 - 12249 mRNA_3881 0.43 0.3
814,651 - 12249 mRNA_3881 0.57 -1.0
814,799 - 12249 mRNA_3881 0.87 1.5
814,806 - 12249 mRNA_3881 0.88 -0.6
814,806 - 12249 mRNA_3881 0.88 0.1
814,942 + 1.5
814,943 - 0.6
814,951 - 0.3
814,973 + -0.1
815,124 - 0.2
815,731 + 12250 mRNA_3882 0.32 -0.7
815,856 + 12250 mRNA_3882 0.39 1.1
816,006 + 12250 mRNA_3882 0.48 0.8
816,016 - 12250 mRNA_3882 0.49 1.1
816,560 - 12250 mRNA_3882 0.82 -0.2
816,591 - 12250 mRNA_3882 0.84 -0.5
816,601 + 12250 mRNA_3882 0.84 -0.1
816,851 + -0.2
816,857 + -0.5
816,865 + 0.1
816,904 - 1.5
816,915 - -0.1
817,016 + 0.6
817,037 - 0.8
817,040 + 0.0
817,041 - 0.0
817,054 - -0.8
817,060 - 0.3
817,063 + 0.9
817,068 + 0.1
817,068 + 0.1
817,104 + 0.1
817,111 + 0.4
817,112 - 0.4
817,115 + 0.8
817,133 + 1.5
817,141 + 1.3
817,161 - -0.1
817,168 + 0.1
817,169 - -0.1
817,179 + 0.2
817,183 - 0.0
817,195 - 1.1
817,196 + 0.2
817,201 + 1.0
817,274 - 0.2
817,344 + 1.4
817,351 + -0.1
817,372 + 0.2
817,383 + 1.5
817,489 - 0.8
817,501 - 1.1
817,503 + -0.3
817,512 + 1.7
817,518 - -0.2
817,623 - 0.7
817,646 + -0.3
817,651 + -1.1
817,660 + -0.5
817,694 + -0.4
817,831 - 12251 mRNA_3883 0.10 0.5