Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3780

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3779: 12147 - HMMPfam-Spc19-PF08287, at 560572 to 561347 12147 mRNA_3780: 12148 - KOG1426 FOG RCC1 domain, at 561594 to 563970 12148

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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561,275 + 1.3
561,419 - 0.3
561,563 + 0.9
561,660 - 0.5
561,672 - -0.3
561,718 + 1.0
561,844 + 12148 mRNA_3780 0.11 2.1
561,846 - 12148 mRNA_3780 0.11 -0.1
561,847 + 12148 mRNA_3780 0.11 -1.1
561,848 - 12148 mRNA_3780 0.11 1.9
561,851 - 12148 mRNA_3780 0.11 1.0
561,852 + 12148 mRNA_3780 0.11 -0.1
561,870 + 12148 mRNA_3780 0.12 -0.5
561,987 + 12148 mRNA_3780 0.17 1.6
561,992 - 12148 mRNA_3780 0.17 0.6
561,992 - 12148 mRNA_3780 0.17 0.5
562,005 - 12148 mRNA_3780 0.17 0.3
562,153 - 12148 mRNA_3780 0.24 0.8
562,891 + 12148 mRNA_3780 0.55 0.1
563,038 - 12148 mRNA_3780 0.61 1.1
563,168 - 12148 mRNA_3780 0.66 0.4
563,319 - 12148 mRNA_3780 0.73 0.9
563,960 - 1.3
564,255 + 1.1
564,483 - 0.3
564,492 + 0.4
564,642 - -0.1
564,762 + 0.3