Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3737

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3736: 12104 - K00573 E2.1.1.77, pcm protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 463337 to 464527 12104 mRNA_3737: 12105 - BLAST TPR-2 domain protein [Rhizoctonia solani AG-3 Rhs1AP], at 464797 to 466425 12105 mRNA_3738: 12106 - K06689 UBE2D, UBC4, UBC5 ubiquitin-conjugating enzyme E2 D, at 466684 to 467899 12106

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
463,990 - 12104 mRNA_3736 0.55 0.8
464,462 + 1.4
464,575 + -0.1
464,577 - -1.2
464,587 + 0.3
464,594 + 0.8
464,602 + -0.5
464,608 + -0.6
464,731 - 0.3
465,084 + 12105 mRNA_3737 0.18 2.2
465,616 - 12105 mRNA_3737 0.50 0.4
466,095 - 12105 mRNA_3737 0.80 0.6
466,341 + 0.8
466,356 - 0.6
466,379 + -0.5
466,470 - 1.2
466,619 - 0.0
466,622 - 2.4
466,622 - 0.0
466,628 - 1.2
466,636 - 1.8
466,646 - 0.1
466,658 - 0.6