Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3688

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3687: 12055 - K14837 NOP12 nucleolar protein 12, at 349923 to 352122 12055 mRNA_3688: 12056 - KOG4285 Mitotic phosphoprotein, at 352283 to 353789 12056 mRNA_3689: 12057 - Hypothetical Protein, at 354043 to 355679 12057

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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351,489 - 12055 mRNA_3687 0.71 0.9
351,950 + 0.7
352,197 - 1.4
352,213 - -0.8
352,228 + 0.7
352,407 + 0.4
352,533 - 12056 mRNA_3688 0.17 0.1
352,671 - 12056 mRNA_3688 0.26 1.4
352,798 + 12056 mRNA_3688 0.34 0.2
353,504 + 12056 mRNA_3688 0.81 0.3
353,799 + -0.3
353,845 - 0.0
353,865 + -0.2
353,876 - -0.8
353,877 - 0.8
353,877 - 0.8
353,883 - 0.2
353,884 - 0.5
353,889 - 0.3
353,890 - 1.0
353,892 + 0.7
353,892 + 0.5
353,896 + 0.6
353,897 - 0.7
353,903 - 0.3
354,062 + -1.9
354,197 + 0.0
354,452 + 12057 mRNA_3689 0.25 0.1