Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3661

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3660: 12028 - HMMPfam-ATPase family associated with various cellular activities (AAA)-PF00004,SUPERFAMILY--SSF52540, at 285259 to 286189 12028 mRNA_3661: 12029 - Hypothetical Protein, at 286182 to 286643 12029 mRNA_3662: 12030 - KOG2768 Translation initiation factor 2, beta subunit (eIF-2beta), at 286767 to 288003 12030

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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285,222 - 0.3
285,346 - 0.8
285,366 + 12028 mRNA_3660 0.11 0.6
285,525 + 12028 mRNA_3660 0.29 1.2
285,534 + 12028 mRNA_3660 0.30 0.6
285,805 + 12028 mRNA_3660 0.59 -0.1
286,475 - 12029 mRNA_3661 0.63 -0.1
286,530 + 12029 mRNA_3661 0.75 -0.2
286,532 - 12029 mRNA_3661 0.76 0.3
286,536 + 12029 mRNA_3661 0.77 1.4
286,541 + 12029 mRNA_3661 0.78 0.8
286,545 - 12029 mRNA_3661 0.79 -0.4
286,560 + 12029 mRNA_3661 0.82 0.4
286,591 - 12029 mRNA_3661 0.89 0.5
286,706 - 0.2
286,720 + 0.2
286,721 - 0.3
286,767 + 0.3
286,858 + 0.5
286,879 - 0.7
286,890 - 0.4
286,891 + 12030 mRNA_3662 0.10 0.2
286,922 - 12030 mRNA_3662 0.13 -1.0
286,972 - 12030 mRNA_3662 0.17 0.4
286,982 + 12030 mRNA_3662 0.17 0.6
287,010 + 12030 mRNA_3662 0.20 0.0
287,063 - 12030 mRNA_3662 0.24 -0.1
287,063 + 12030 mRNA_3662 0.24 0.2
287,070 + 12030 mRNA_3662 0.24 0.2
287,079 - 12030 mRNA_3662 0.25 0.5
287,085 - 12030 mRNA_3662 0.26 -0.8
287,092 + 12030 mRNA_3662 0.26 0.4
287,100 + 12030 mRNA_3662 0.27 0.3
287,107 - 12030 mRNA_3662 0.27 -0.2
287,108 + 12030 mRNA_3662 0.28 1.3
287,211 + 12030 mRNA_3662 0.36 -0.7
287,221 - 12030 mRNA_3662 0.37 0.6
287,222 + 12030 mRNA_3662 0.37 -0.2
287,231 - 12030 mRNA_3662 0.38 0.3
287,237 - 12030 mRNA_3662 0.38 0.8
287,239 + 12030 mRNA_3662 0.38 1.4
287,246 + 12030 mRNA_3662 0.39 0.8
287,247 - 12030 mRNA_3662 0.39 1.3
287,248 + 12030 mRNA_3662 0.39 0.0
287,248 - 12030 mRNA_3662 0.39 0.2
287,254 + 12030 mRNA_3662 0.39 -0.4
287,272 + 12030 mRNA_3662 0.41 0.2
287,308 - 12030 mRNA_3662 0.44 0.4
287,334 + 12030 mRNA_3662 0.46 0.3
287,346 + 12030 mRNA_3662 0.47 -0.2
287,389 + 12030 mRNA_3662 0.50 2.2
287,403 - 12030 mRNA_3662 0.51 -0.7
287,408 + 12030 mRNA_3662 0.52 0.5
287,410 + 12030 mRNA_3662 0.52 0.3
287,412 - 12030 mRNA_3662 0.52 -0.1
287,419 + 12030 mRNA_3662 0.53 0.6
287,421 + 12030 mRNA_3662 0.53 0.9
287,429 - 12030 mRNA_3662 0.54 1.3
287,431 - 12030 mRNA_3662 0.54 -0.3
287,433 - 12030 mRNA_3662 0.54 -0.6
287,446 - 12030 mRNA_3662 0.55 -0.2
287,478 + 12030 mRNA_3662 0.57 1.4
287,507 - 12030 mRNA_3662 0.60 0.2
287,543 - 12030 mRNA_3662 0.63 0.8
287,546 + 12030 mRNA_3662 0.63 -0.6
287,579 - 12030 mRNA_3662 0.66 -0.3