Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3653

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3652: 12020 - K17278 PGRMC1_2 membrane-associated progesterone receptor component, at 259462 to 260271 12020 mRNA_3653: 12021 - KOG2437 Muskelin, at 260397 to 263923 12021

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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259,431 - -0.1
259,459 + 1.0
259,576 - 12020 mRNA_3652 0.14 0.4
259,600 + 12020 mRNA_3652 0.17 0.3
259,727 + 12020 mRNA_3652 0.33 0.6
259,736 - 12020 mRNA_3652 0.34 -0.2
259,766 + 12020 mRNA_3652 0.38 2.3
259,915 + 12020 mRNA_3652 0.56 0.4
260,019 + 12020 mRNA_3652 0.69 1.7
260,029 + 12020 mRNA_3652 0.70 0.8
260,045 + 12020 mRNA_3652 0.72 -0.3
260,322 - 1.5
260,324 + -0.3
260,329 - 0.4
260,330 + 1.4
260,335 + 1.0
260,336 + -0.3
260,340 + 2.2
260,458 - 0.7
260,490 + 1.8
260,498 + 1.0
260,517 + -0.0
260,620 - 1.7
260,620 - 0.7
260,659 + 0.4
260,772 + 12021 mRNA_3653 0.11 0.7
260,779 + 12021 mRNA_3653 0.11 -0.4
260,781 + 12021 mRNA_3653 0.11 -0.2
260,787 + 12021 mRNA_3653 0.11 0.3
260,792 + 12021 mRNA_3653 0.11 0.3
260,816 + 12021 mRNA_3653 0.12 0.4
260,928 - 12021 mRNA_3653 0.15 -0.1
260,947 + 12021 mRNA_3653 0.16 1.3
261,105 + 12021 mRNA_3653 0.20 0.6
261,479 + 12021 mRNA_3653 0.31 -0.3
261,643 + 12021 mRNA_3653 0.35 -1.1
261,662 - 12021 mRNA_3653 0.36 0.1
262,047 - 12021 mRNA_3653 0.47 0.7
262,056 - 12021 mRNA_3653 0.47 0.4
262,325 + 12021 mRNA_3653 0.55 0.2
262,481 - 12021 mRNA_3653 0.59 -0.5
262,768 + 12021 mRNA_3653 0.67 0.2
263,042 - 12021 mRNA_3653 0.75 -0.0
263,222 + 12021 mRNA_3653 0.80 0.7
263,645 - 0.9
263,805 + 0.5
263,816 + 0.2
263,914 + 0.1
263,930 + 0.7
263,944 - 0.3
264,093 + 2.3
264,098 + -0.8
264,106 + 1.0
264,108 + -0.2
264,110 + -0.3
264,117 + 0.3
264,122 + 0.6
264,169 - 0.6
264,308 - 0.5
264,312 - 0.8
264,325 - 1.1
264,332 + -0.9
264,332 - 0.3
264,334 + 1.0
264,399 - 1.7
264,459 + 0.1
264,462 + -0.0
264,466 - 0.2
264,466 - 0.0
264,467 + 0.2
264,479 - 0.5
264,575 - 0.3
264,585 - 0.9
264,599 + 0.5
264,599 - 0.0
264,601 + 0.7
264,603 + 0.7
264,619 - -0.7
264,633 - -0.1
264,656 + -0.1
264,668 - 0.9
264,744 - 1.2
264,829 - 0.3
264,891 + 0.6
264,897 - 0.6