Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3633

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3633: 12001 - KOG1074 Transcriptional repressor SALM, at 211047 to 213295 12001 mRNA_3634: 12002 - KOG2456 Aldehyde dehydrogenase, at 213705 to 215567 12002

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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210,092 - -1.6
210,261 + 0.8
210,951 - 1.4
211,119 - 0.0
211,809 - 12001 mRNA_3633 0.34 0.6
211,831 + 12001 mRNA_3633 0.35 0.5
212,475 + 12001 mRNA_3633 0.63 0.2
212,502 + 12001 mRNA_3633 0.65 0.4
212,740 + 12001 mRNA_3633 0.75 0.0
212,828 + 12001 mRNA_3633 0.79 -0.3
213,027 - 12001 mRNA_3633 0.88 0.0
213,304 - -0.7
213,430 - -0.0
213,771 + -0.1
214,018 - 12002 mRNA_3634 0.17 0.7
214,027 + 12002 mRNA_3634 0.17 0.1
214,047 + 12002 mRNA_3634 0.18 -1.4
214,070 + 12002 mRNA_3634 0.20 1.3
214,266 + 12002 mRNA_3634 0.30 0.7