Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3632

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3631: 11999 - Hypothetical Protein, at 206956 to 207306 11999 mRNA_3632: 12000 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 207689 to 209563 12000

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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206,856 - 1.0
207,039 - 11999 mRNA_3631 0.24 0.1
207,315 + 0.5
207,605 + 0.1
207,606 - 0.0
208,208 - 12000 mRNA_3632 0.28 -0.2
208,229 - 12000 mRNA_3632 0.29 2.0
208,607 - 12000 mRNA_3632 0.49 0.5
208,923 + 12000 mRNA_3632 0.66 0.4
209,061 - 12000 mRNA_3632 0.73 0.1
209,514 + 0.9
209,634 + 1.3
209,634 - 1.1
209,650 - -0.2
209,753 - 1.2
209,777 + 0.4
209,935 - 0.7
209,952 - 1.7
209,953 + 1.2
209,973 + 2.0
210,092 - -1.6
210,261 + 0.8