Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3584

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3583: 11951 - Hypothetical Protein, at 104086 to 104307 11951 mRNA_3584: 11952 - K00122 FDH formate dehydrogenase, at 104607 to 106241 11952 mRNA_3585: 11953 - KOG1339 Aspartyl protease, at 106973 to 108703 11953

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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103,709 + 0.2
103,715 - 1.1
103,715 - 0.4
103,717 - -1.5
103,734 + 2.0
103,876 - -0.4
104,015 + 0.5
104,134 - 11951 mRNA_3583 0.22 1.5
104,146 + 11951 mRNA_3583 0.27 0.4
104,147 - 11951 mRNA_3583 0.27 -0.7
104,888 + 11952 mRNA_3584 0.17 0.5
104,889 + 11952 mRNA_3584 0.17 1.0
105,172 - 11952 mRNA_3584 0.35 0.9
105,276 - 11952 mRNA_3584 0.41 0.3
106,048 - 11952 mRNA_3584 0.88 0.6
106,160 - 0.6
106,325 - 0.4
106,343 - 1.2
106,344 - 0.8
106,348 + 0.2
106,352 - 1.3
106,359 + 0.7
106,362 + -1.1
106,362 + -0.1
106,373 - 0.6
106,379 + 1.0
106,380 + 0.1
106,388 + 0.2
106,397 + 0.6
106,400 - -0.1
106,412 + 0.2
106,412 - 0.4
106,416 + -1.5
106,417 + -0.3
106,441 - 1.4
106,445 + 0.7
106,459 - 0.2
106,489 + 1.4
106,490 - 0.3
106,500 - 0.0
106,505 - -0.4
106,507 + 2.2
106,511 - -0.1
106,519 + 0.4
106,541 - 0.8
106,542 + -0.3
106,555 + 0.3
106,654 + 1.2
106,799 - 0.0
106,808 - 0.2
106,822 + 2.6
107,061 - -0.2
107,107 + -0.4